Nu FreesurferAnat

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Inheritance graph

Defined in file : brainvisa/toolboxes/freesurfer/types/freesurfer_types.py

Used in the following processes

02 Launch Freesurfer full pipeline recon-all
Convert Freesurfer images to nifti format
Freesurfer NATIVE meshes To BrainVisa conversion pipeline
Freesurfer outputs To BrainVisa conversion pipeline

Associated formats

Aperio svs
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
Sakura svslide
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
Zeiss czi

Associated ontology rules

{subject}/mri/nu

subj-{subject}/ses-{acquisition}/mri/nu

Key attributes

subject

subject ,  acquisition